SNP Profiles of KER 6   View Data

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 Key

 1234567891011121314
_Input profile
TTCCCTCCGGTTATAACCGGGTGGCTAA
1._RUQ_408
_______AA___GG__
2._RUQ_408
_______AA___GG__
3._RUQ_408
_______AA___GG__
4._MITC-000028
_______AA___GG__
 1516171819202122232425262728
_Input profile
AGAACTAACCAAAGCCAAACCCCCAGCC
1._RUQ_408
AG____AC_CC_ACCC___
2._RUQ_408
_______CC_ACCC___
3._RUQ_408
AG____AC_CC_ACGG___
4._MITC-000028
AG____AC_CC_ACGG___
 2930313233343536373839404142
_Input profile
AACCCCGGAGCTTTAAAACTGGAGCCAG
1._RUQ_408
__CCGGAG__AA__GG-_AG
2._RUQ_408
__________CC___
3._RUQ_408
___CCAG__AA_CCCCAG_AG
4._MITC-000028
___CCAG__AA_CCCCAG_AG
 4344454647484950515253545556
_Input profile
CTCCAATTAGTTCTTTAATTTTGTTTAG
1._RUQ_408
CC_________TT___
2._RUQ_408
______________
3._RUQ_408
____AG_____AA___
4._MITC-000028
____AG_____AA___
 57585960          
_Input profile
GGGGCTATX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._RUQ_408
_GG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._RUQ_408
_CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._RUQ_408
_CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._MITC-000028
_CC__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: KER_6 RUQ_408

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

1._KER_6 RUQ_408

93.8 %
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

2._KER_6 RUQ_408

71.4 %
7 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

3._KER_6 RUQ_408

64.7 %
17 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

4._KER_6 MITC-000028

64.7 %
17 shared markers

USDA-SHRS, United States of America
 Mars, 2018

 


  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP33 4TcSNP49 5TcSNP52
6TcSNP131 7TcSNP143 8TcSNP144 9TcSNP176 10TcSNP189
11TcSNP194 12TcSNP230 13TcSNP290 14TcSNP305 15TcSNP329
16TcSNP363 17TcSNP421 18TcSNP519 19TcSNP522 20TcSNP529
21TcSNP546 22TcSNP577 23TcSNP589 24TcSNP591 25TcSNP602
26TcSNP640 27TcSNP642 28TcSNP644 29TcSNP645 30TcSNP660
31TcSNP702 32TcSNP723 33TcSNP731 34TcSNP739 35TcSNP800
36TcSNP823 37TcSNP835 38TcSNP836 39TcSNP872 40TcSNP899
41TcSNP945 42TcSNP998 43TcSNP999 44TcSNP1010 45TcSNP1019
46TcSNP1053 47TcSNP1062 48TcSNP1112 49TcSNP1144 50TcSNP1205
51TcSNP1230 52TcSNP1237 53TcSNP1253 54TcSNP1275 55TcSNP1293
56TcSNP1401 57TcSNP1404 58TcSNP1458 59TcSNP1524 60TcSNP1527